performs resampling of light-sheet microscopy images
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:'sample1' ]
[ id:'sample1' ]
stitch_directory{:bash}
:directory
Directory containing stitched images format
*.{tif,tiff}
parameter_file{:bash}
:file
File containing parameters for numorph tools
*.{csv}
resampled{:bash}
results/resampled/{:bash}
Directory containing resampled images
/{results}/resampled/*
versions_numorph_analyze{:bash}
${task.process}{:bash}
:string
The name of the process
numorph_resample{:bash}
The name of the tool
1.0.0{:bash}
The expression to obtain the version of the tool
versions{:bash}
A toolkit for processing and analysis of light-sheet microscopy images
